PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G53950.1   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15170.1 11Arabidopsis thaliana2E-8916278880 (0)_
AT5G61430.1 11Arabidopsis thaliana1E-8515478890 (0)_
AT5G07680.2 11Arabidopsis thaliana9E-8419165800 (0)_
Os06g23650.1 7Oryza sativa2E-8915280930 (0)_
Os04g38720.1 7Oryza sativa4E-8625655630 (0)_
Os09g32260.1 7Oryza sativa7E-8115775850 (0)_
v1_GRMZM2G139700_P01 4a53Zea mays1E-9032751620 (0)_
GRMZM2G139700_P01 3.21Zea mays8E-9032750620 (0)_
GRMZM2G393433_P01 3.21Zea mays7E-8832747580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAM(1)
TargetP: Cytoplasm (Class 2 C0.031; M0.175; S0.145; _0.944)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 375 aa (-cTP 348)
Molecular Weight 41.43 kDA(-cTP )
PI 8.59(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help