PPDB

PPDB	The Plant Proteome Database

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AT5G53910.1 RING/U-box superfamily protein

Lab Annot.

Mapman: 1.2.2 PS.photorespiration.glycolate oxydase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18760.1 11 Arabidopsis thaliana 9E-21 102 43 58 0 (0) _
AT1G21960.1 11 Arabidopsis thaliana 2E-20 231 29 45 0 (0) _
AT1G18770.1 11 Arabidopsis thaliana 7E-20 90 44 61 0 (0) _
Os06g01200.1 7 Oryza sativa 6E-11 57 40 56 3 (3) _
Os09g06770.1 7 Oryza sativa 6E-11 64 40 54 0 (0) S
Os12g04590.1 7 Oryza sativa 1E-10 69 30 60 0 (0) _
v1_GRMZM2G124441_P04 4a53 Zea mays 8E-11 49 38 69 0 (0) _
GRMZM2G124441_P04 3.21 Zea mays 8E-11 49 38 69 0 (0) _
v1_GRMZM2G124441_P03 4a53 Zea mays 8E-11 49 38 69 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_2(2) FANCL_C(1) Prok-RING_1(2) Prok-RING_4(1) zf-ANAPC11(1) zf-C2H2_4(2) zf-C
TargetP:	Cytoplasm (Class 2 C0.126; M0.205; S0.055; _0.834)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	230 aa (-cTP 185)
Molecular Weight	26.80 kDA(-cTP )
PI	8.35(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data