PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G53870.1 early nodulin-like protein 1

Lab Annot.

plastocyanin-like domain-containing protein
Mapman: 26.19 misc.plastocyanin-like

Curated Location

TAIR curated location: anchored to membrane12068095,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53870.2 11 Arabidopsis thaliana 0 370 97 97 0 (0) S
AT4G27520.1 11 Arabidopsis thaliana 1E-60 387 42 56 531 (435) S
AT4G28365.1 11 Arabidopsis thaliana 1E-38 146 43 65 0 (0) S
Os01g54430.1 7 Oryza sativa 4E-37 137 45 65 0 (0) S
Os01g10480.1 7 Oryza sativa 4E-31 109 54 64 0 (0) S
Os01g57880.1 7 Oryza sativa 3E-26 115 45 60 0 (0) S
GRMZM2G010762_P01 3.21 Zea mays 6E-34 110 49 66 0 (0) S
Zm00001eb153120_P001 agpv5 Zea mays 6E-34 110 49 66 0 (0) S
v1_GRMZM2G010762_P01 4a53 Zea mays 6E-34 110 49 66 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cu_bind_like(1)
TargetP:	Secreted (Class 1 C0.010; M0.007; S0.992; _0.042)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	370 aa (-cTP 347)
Molecular Weight	38.40 kDA(-cTP )
PI	9.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data