PPDB

PPDB	The Plant Proteome Database

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AT5G53840.1 F-box/RNI-like/FBD-like domains-containing protein

Lab Annot.

F-box/RNI-like/FBD-like domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G51370.1 11 Arabidopsis thaliana 1E-112 444 47 62 0 (0) _
AT1G51370.3 11 Arabidopsis thaliana 2E-102 444 45 59 0 (0) _
AT1G51370.2 11 Arabidopsis thaliana 2E-92 344 50 63 0 (0) _
Os01g41270.1 7 Oryza sativa 1E-12 227 28 48 0 (0) M
Zm00001eb295990_P003 agpv5 Zea mays 6E-11 370 26 40 0 (0) _
GRMZM2G154626_P01 3.21 Zea mays 6E-11 195 32 47 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(2) FBD(2) LRR_2(3) LRR_4(3) PCuAC(1)
TargetP:	Cytoplasm (Class 3 C0.332; M0.025; S0.045; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	444 aa (-cTP 402)
Molecular Weight	50.91 kDA(-cTP )
PI	6.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data