PPDB

PPDB	The Plant Proteome Database

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AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G44220.1 11 Arabidopsis thaliana 3E-50 182 41 64 0 (0) _
AT3G11660.1 11 Arabidopsis thaliana 1E-48 169 39 66 1 (1) M
AT3G52470.1 11 Arabidopsis thaliana 3E-45 184 40 59 1 (1) S
Os11g05860.1 7 Oryza sativa 7E-45 192 39 63 4 (4) _
Os12g06260.1 7 Oryza sativa 8E-44 191 39 62 0 (0) _
Os04g58860.1 7 Oryza sativa 3E-35 184 32 56 0 (0) _
v1_GRMZM2G368151_P01 4a53 Zea mays 1E-40 182 35 59 2 (2) _
v1_GRMZM2G368151_P02 4a53 Zea mays 1E-40 182 35 59 2 (2) _
GRMZM5G807602_P01 3.21 Zea mays 1E-40 182 35 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arabinose_Isome(1) LEA_2(1) Otopetrin(1)
TargetP:	Cytoplasm (Class 2 C0.166; M0.081; S0.068; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	213 aa (-cTP 202)
Molecular Weight	23.91 kDA(-cTP )
PI	9.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data