PPDB

PPDB	The Plant Proteome Database

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AT5G53550.1 YELLOW STRIPE like 3

Lab Annot.

Mapman: 34.12 transport.metal

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53550.6 11 Arabidopsis thaliana 0 675 100 100 0 (0) _
AT5G53550.5 11 Arabidopsis thaliana 0 675 100 100 0 (0) _
AT5G53550.3 11 Arabidopsis thaliana 0 675 100 100 0 (0) _
Os04g45860.1 7 Oryza sativa 0 633 71 83 0 (0) _
Os04g45900.1 7 Oryza sativa 0 662 65 80 0 (0) _
Os02g43370.1 7 Oryza sativa 0 668 64 79 0 (0) _
Zm00001eb075200_P002 agpv5 Zea mays 0 652 69 82 0 (0) _
Zm00001eb075200_P003 agpv5 Zea mays 0 652 69 82 0 (0) _
Zm00001eb075200_P001 agpv5 Zea mays 0 652 69 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OPT(1)
TargetP:	Cytoplasm (Class 2 C0.005; M0.206; S0.028; _0.962)
Predotar:
Subcel. Location:
TM-HMM prediction:	12 TMs
Aramemnon:	13 TMs
TAT position:
Length	675 aa (-cTP 598)
Molecular Weight	74.15 kDA(-cTP )
PI	8.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data