PPDB

PPDB	The Plant Proteome Database

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AT5G53500.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53500.2 11 Arabidopsis thaliana 0 654 100 100 0 (0) _
AT5G24320.1 11 Arabidopsis thaliana 0 694 49 65 0 (0) _
AT5G24320.2 11 Arabidopsis thaliana 0 698 49 65 0 (0) _
Os04g48010.2 7 Oryza sativa 2E-161 703 41 57 0 (0) C
Os04g48010.1 7 Oryza sativa 2E-161 703 41 57 0 (0) C
Os03g02440.2 7 Oryza sativa 2E-153 504 47 65 0 (0) _
Zm00001eb073740_P001 agpv5 Zea mays 1E-161 694 41 57 0 (0) _
v1_GRMZM2G125656_P01 4a53 Zea mays 1E-161 694 41 57 0 (0) _
Zm00001eb073740_P002 agpv5 Zea mays 1E-161 694 41 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(6) DUF5734(1) Ge1_WD40(5) Paramyxo_P_V_N(1) WD40(7) WD40_like(2)
TargetP:	Cytoplasm (Class 2 C0.142; M0.062; S0.050; _0.851)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	654 aa (-cTP 589)
Molecular Weight	72.45 kDA(-cTP )
PI	6.28(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data