PPDB

PPDB	The Plant Proteome Database

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AT5G53430.1 SET domain group 29

Lab Annot.

Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G27910.1 11 Arabidopsis thaliana 0 1059 76 83 0 (0) _
AT3G61740.2 11 Arabidopsis thaliana 0 952 50 67 1 (1) _
AT3G61740.1 11 Arabidopsis thaliana 0 985 49 65 1 (1) _
Os01g11952.1 7 Oryza sativa 0 981 50 65 0 (0) _
Os01g46700.1 7 Oryza sativa 0 836 50 64 0 (0) _
Os09g04890.1 7 Oryza sativa 1E-67 473 33 50 0 (0) _
Zm00001eb338670_P002 agpv5 Zea mays 0 593 57 70 0 (0) _
GRMZM6G025093_P02 3.21 Zea mays 0 870 43 57 0 (0) _
GRMZM2G170412_P02 3.21 Zea mays 0 870 43 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHD(3) PHD_2(2) PWWP(1) SET(2) zf-HC5HC2H(3) zf-HC5HC2H_2(2) zf-RING_9(3)
TargetP:	Cytoplasm (Class 2 C0.050; M0.168; S0.025; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1043 aa (-cTP 973)
Molecular Weight	119.12 kDA(-cTP )
PI	8.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data