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PPDB	The Plant Proteome Database

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AT5G53370.1 pectin methylesterase PCR fragment F

Lab Annot.

pectin methylesterase PCR fragment F
Mapman: 10.8.99 cell wall.pectin*esterases.misc

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53370.2 11 Arabidopsis thaliana 0 587 100 100 0 (0) _
AT3G49220.3 11 Arabidopsis thaliana 0 602 64 79 0 (0) _
AT3G49220.1 11 Arabidopsis thaliana 0 602 64 79 1 (1) C
Os01g13320.1 7 Oryza sativa 0 561 49 66 0 (0) _
Os02g18650.1 7 Oryza sativa 9E-170 440 55 70 0 (0) S
Os07g47830.1 7 Oryza sativa 6E-153 528 44 61 0 (0) S
Zm00001eb130500_P001 agpv5 Zea mays 7E-152 531 47 61 0 (0) S
Zm00001eb130500_P002 agpv5 Zea mays 7E-152 531 47 61 0 (0) S
v1_GRMZM2G136106_P01 4a53 Zea mays 7E-152 531 47 61 58 (58) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BCS1_N(1) Pectate_lyase_3(1) Pectinesterase(1) PMEI(1)
TargetP:	Cytoplasm (Class 1 C0.092; M0.081; S0.036; _0.962)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	587 aa (-cTP 531)
Molecular Weight	64.24 kDA(-cTP )
PI	7.55(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18796151(cell wall (hypocotyl))
19376835(leaf phosphoproteins)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data