PPDB

PPDB	The Plant Proteome Database

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AT5G53350.1 CLP protease regulatory subunit X

Lab Annot.

CLPX1 chaperone
Mapman: 29.5.5.30* protein.degradation.serine protease.regulator

Curated Location

mitochondria (Pubmed: 11352464 )

TAIR curated location: mitochondrion & mitochondrial matrix11352464

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G33360.1 11 Arabidopsis thaliana 0 407 77 87 1 (0) M
AT5G49840.3 11 Arabidopsis thaliana 0 399 69 84 0 (0) C
AT5G49840.2 11 Arabidopsis thaliana 0 404 68 83 0 (0) C
Os02g35630.1 7 Oryza sativa 0 423 76 87 4 (4) M
Os02g19150.1 7 Oryza sativa 0 426 75 87 1 (1) M
Os01g66330.1 7 Oryza sativa 0 428 68 83 0 (0) M
Zm00001eb182540_P001 agpv5 Zea mays 0 483 70 81 0 (0) M
Zm00001eb182540_P003 agpv5 Zea mays 0 492 69 79 0 (0) _
Zm00001eb182540_P002 agpv5 Zea mays 0 492 69 79 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_19(2) AAA_2(1) AAA_22(1) AAA_24(1) AAA_
TargetP:	Mitochondria (Class 2 C0.128; M0.798; S0.013; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	579 aa (-cTP 501)
Molecular Weight	61.96 kDA(-cTP )
PI	7.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(mitochondria)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data