PPDB

 The Plant Proteome Database

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AT5G53250.1   arabinogalactan protein 22
Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61640.1 11Arabidopsis thaliana1E-166355760 (0)S
AT2G46330.1 11Arabidopsis thaliana2E-165362790 (0)S
AT5G24105.1 11Arabidopsis thaliana2E-114875870 (0)S
Os01g46850.1 7Oryza sativa3E-153680910 (0)S
Os05g12580.1 7Oryza sativa4E-092781920 (0)S
Os02g16500.1 7Oryza sativa1E-072680880 (0)S
Zm00001eb359480_P001 agpv5Zea mays6E-092684920 (0)S
GRMZM2G020131_P01 3.21Zea mays6E-092684920 (0)S
v1_GRMZM2G020131_P01 4a53Zea mays6E-092684920 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AGP(1) DUF4220(1) ODV-E18(1)
TargetP: Secreted (Class 1 C0.019; M0.019; S0.994; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 63 aa (-cTP 38)
Molecular Weight 6.67 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help