PPDB

PPDB	The Plant Proteome Database

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AT5G53210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.

Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53210.2 11 Arabidopsis thaliana 0 344 99 100 0 (0) _
AT3G06120.1 11 Arabidopsis thaliana 8E-39 262 34 50 0 (0) M
AT3G24140.1 11 Arabidopsis thaliana 5E-25 118 47 64 0 (0) _
Os02g15760.1 7 Oryza sativa 8E-81 308 52 62 0 (0) _
Os06g33450.2 7 Oryza sativa 2E-76 379 44 55 0 (0) _
Os06g33450.1 7 Oryza sativa 7E-64 360 41 53 0 (0) _
Zm00001eb238140_P001 agpv5 Zea mays 8E-82 319 50 62 0 (0) _
GRMZM2G064638_P01 3.21 Zea mays 8E-82 319 50 62 0 (0) _
Zm00001eb204110_P001 agpv5 Zea mays 9E-82 315 50 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC45(2) FAM176(1) Fibin(2) HLH(1) PBP1_TM(1) RPT(1) RR_TM4-6(1)
TargetP:	Cytoplasm (Class 3 C0.131; M0.059; S0.289; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	364 aa (-cTP 348)
Molecular Weight	40.17 kDA(-cTP )
PI	5.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data