PPDB

The Plant Proteome Database

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AT5G53200.1   Homeodomain-like superfamily protein

Lab Annot.
Mapman: 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30420.1 11Arabidopsis thaliana1E-3810364760 (0)M
AT2G30424.1 11Arabidopsis thaliana4E-3810861730 (0)M
AT2G30432.1 11Arabidopsis thaliana1E-358471800 (0)M
Os01g43180.1 7Oryza sativa2E-195356840 (0)_
Os01g43230.3 7Oryza sativa4E-156643710 (0)_
Os01g43230.2 7Oryza sativa4E-156643710 (0)_
Zm00001eb159610_P001 agpv5Zea mays2E-155350770 (0)_
GRMZM2G057955_P01 3.21Zea mays2E-155350770 (0)_
v1_GRMZM2G057955_P01 4a53Zea mays2E-155350770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Myb_DNA-bind_6(1) Myb_DNA-binding(1)
TargetP: Cytoplasm (Class 3 C0.056; M0.327; S0.042; _0.841)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 106 aa (-cTP 88)
Molecular Weight 13.01 kDA(-cTP )
PI 9.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help