PPDB

PPDB	The Plant Proteome Database

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AT5G53180.1 polypyrimidine tract-binding protein 2

Lab Annot.

Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53180.6 11 Arabidopsis thaliana 0 297 100 100 0 (0) _
AT5G53180.4 11 Arabidopsis thaliana 0 297 100 100 0 (0) M
AT5G53180.2 11 Arabidopsis thaliana 0 297 100 100 3 (0) M
Os08g33830.1 7 Oryza sativa 0 339 75 85 0 (0) _
Os01g43170.1 7 Oryza sativa 0 336 75 85 0 (0) _
Os03g25980.2 7 Oryza sativa 0 443 63 72 0 (0) M
GRMZM5G883601_P01 3.21 Zea mays 0 332 72 86 0 (0) M
Zm00001eb018360_P004 agpv5 Zea mays 0 332 72 86 0 (0) M
v1_GRMZM2G178169_P02 4a53 Zea mays 0 338 73 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4523(3) NtCtMGAM_N(2) RRM_1(3) RRM_5(2) RRM_8(2) RRM_occluded(3)
TargetP:	Cytoplasm (Class 5 C0.198; M0.332; S0.040; _0.375)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	429 aa (-cTP 385)
Molecular Weight	46.88 kDA(-cTP )
PI	6.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data