PPDB

PPDB	The Plant Proteome Database

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AT5G53110.1 RING/U-box superfamily protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46495.1 11 Arabidopsis thaliana 5E-73 350 39 56 0 (0) S
AT2G46495.2 11 Arabidopsis thaliana 1E-69 349 37 55 0 (0) S
AT2G46494.1 11 Arabidopsis thaliana 6E-66 356 39 53 0 (0) S
Os12g04130.1 7 Oryza sativa 3E-17 82 47 67 0 (0) C
Os01g53500.1 7 Oryza sativa 1E-16 75 49 61 0 (0) S
Os12g42540.1 7 Oryza sativa 1E-15 73 45 61 1 (1) _
Zm00001eb153950_P001 agpv5 Zea mays 7E-19 75 52 66 0 (0) S
Zm00001eb134610_P001 agpv5 Zea mays 2E-18 109 36 52 0 (0) S
AC206768.3_FGP005 3.21 Zea mays 2E-18 109 36 52 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) GUB_WAK_bind(1) RINGv(1) WAK_assoc(1) zf-ANAPC11(2) zf-C3HC4(1) zf-C3
TargetP:	Secreted (Class 1 C0.073; M0.017; S0.914; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	382 aa (-cTP 353)
Molecular Weight	42.93 kDA(-cTP )
PI	8.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data