PPDB

PPDB	The Plant Proteome Database

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AT5G53080.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

WHITE TO GREEN 1 (WTG1)
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 29140512 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G37590.2 11 Arabidopsis thaliana 9E-07 197 27 44 0 (0) M
AT5G37590.1 11 Arabidopsis thaliana 1E-06 197 27 44 0 (0) M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC5(3) LZ3wCH(1) MIT(2) PPR(3) TipAS(1) TPR_1(5) TPR_10(6) TPR_11(2) TPR_12(5
TargetP:	Chloroplast (Class 1 C0.953; M0.061; S0.002; _0.022)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	564 aa (-cTP 494)
Molecular Weight	63.11 kDA(-cTP 55.31)
PI	6.47(-cTP 5.61)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1478	Detail								leaf [A. thaliana]	co-IP GST-ClpSmut stroma	clpc1 x clps (rep. 5)

* For details about the exprimental sources click here.

Published Proteomics Data

18433418(redox proteome (chloroplast))

Comparative Proteomics Data