PPDB

 The Plant Proteome Database

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AT5G52980.1   ER-based factor for assembly of V-ATPase
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52980.2 11Arabidopsis thaliana6E-1171641001000 (0)_
Os02g13200.1 7Oryza sativa6E-7318357770 (0)C
GRMZM2G047781_P01 3.21Zea mays6E-7418261740 (0)C
Zm00001eb024850_P002 agpv5Zea mays6E-7418261740 (0)C
v1_GRMZM2G047781_P01 4a53Zea mays6E-7418261740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATPase_gene1(1) DUF1772(1) Mesothelin(1) Myc-LZ(1) Vma12(1)
TargetP: Cytoplasm (Class 4 C0.277; M0.087; S0.023; _0.632)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 222 aa (-cTP 166)
Molecular Weight 24.52 kDA(-cTP )
PI 9.57(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help