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AT5G52960.1
tRNA dimethylallyltransferase
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| Lab Annot. |
unknown protein (DUF3143)
Mapman: 35.2 not assigned.unknown |
| Curated Location |
plastid stroma (Pubmed: 23198870 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF3143(1) |
| TargetP: |
Chloroplast (Class 1 C0.914; M0.015; S0.104; _0.015) |
| Predotar: |
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| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
170 aa (-cTP 128) (-lTP 103) |
| Molecular Weight |
19.16 kDA(-cTP 14.65)(-lTP 12.07) |
| PI |
8.27(-cTP 6.12)(-lTP 5.200) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 355 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1411 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | clpr2-1 |
| 1412 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | clpr2-1 |
| 1413 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue -114 rep1tR1 | wild-type |
| 1455 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 1) |
| 1456 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1459 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clps (rep. 2) |
| 1463 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 3) |
| 1465 | Detail | | | | | | | | leaf [A. thaliana] | co-IP GST-ClpS stroma | clpc1 x clps (rep. 1) |
| 1467 | Detail | | | | | | | | leaf [A. thaliana] | co-IP GST-ClpS stroma | clpc1 x clps (rep. 2) |
| 1469 | Detail | | | | | | | | leaf [A. thaliana] | co-IP GST-ClpS stroma | clpc1 x clps (rep. 3) |
| 1481 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 1) |
| 1948 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 1949 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2113 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2116 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | cGep |
| 2263 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp | Clp C1 trap |
| 2267 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp | Clp C1 TRAP |
| 2287 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2289 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2291 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2299 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2300 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2303 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2306 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18463617(suspension cells-phosphorylated proteins)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
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Comparative Proteomics Data
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