PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G52950.1   LIM domain protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52950.2 11Arabidopsis thaliana07061001000 (0)_
Os01g12250.1 7Oryza sativa1E-4036334480 (0)_
Zm00001eb119640_P001 agpv5Zea mays2E-76101230450 (0)_
GRMZM2G027007_P01 3.21Zea mays1E-64100529430 (0)_
Zm00001eb119640_P002 agpv5Zea mays8E-6382530460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 2 C0.001; M0.047; S0.036; _0.670)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 948 aa (-cTP 881)
Molecular Weight 106.65 kDA(-cTP )
PI 5.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help