PPDB

 The Plant Proteome Database

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AT5G52860.1   ABC-2 type transporter family protein
Lab Annot.
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25750.1 11Arabidopsis thaliana058081880 (0)_
AT5G19410.1 11Arabidopsis thaliana6E-17659843660 (0)C
AT5G19410.2 11Arabidopsis thaliana7E-17659843660 (0)C
Os06g30730.1 7Oryza sativa059155710 (0)_
Os05g31910.1 7Oryza sativa4E-16462943610 (0)C
Os01g42900.1 7Oryza sativa6E-15258541620 (0)C
Zm00001eb372940_P002 agpv5Zea mays059155710 (0)_
GRMZM5G874756_P01 3.21Zea mays059155710 (0)_
Zm00001eb162070_P001 agpv5Zea mays3E-16758943630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_29(1) AAA_30(1) AAA_33(1)
TargetP: Chloroplast (Class 5 C0.730; M0.057; S0.005; _0.611)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 589 aa (-cTP 525)
Molecular Weight 65.93 kDA(-cTP 59.11)
PI 9.41(-cTP 9.49)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help