PPDB

 The Plant Proteome Database

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AT5G52810.1   NAD(P)-binding Rossmann-fold superfamily protein
Lab Annot. ornithine cyclodeaminase/mu-crystallin protein (plastid?)
Mapman: 16.99 secondary metabolism.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g38930.1 7Oryza sativa1E-9133347660 (0)_
Zm00001eb021880_P001 agpv5Zea mays4E-8933347660 (0)_
GRMZM2G125266_P01 3.21Zea mays4E-89333476682 (16)_
v1_GRMZM2G125266_P01 4a53Zea mays4E-89333476619 (19)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF371(1) F420_oxidored(1) OCD_Mu_crystall(1) Sacchrp_dh_NADP(1) Shikimate_DH(1)
TargetP: Chloroplast (Class 2 C0.861; M0.041; S0.019; _0.071)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 283)
Molecular Weight 35.22 kDA(-cTP 30.58)
PI 6.30(-cTP 5.99)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
339Detail       leaf [A. thaliana] chloroplast stromawild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2070Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2079Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2084Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2142Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2143Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2148Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19816138(rosette leaves)
21173025(root proteome)

Comparative Proteomics Data

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