PPDB

 The Plant Proteome Database

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AT5G52790.1   CBS domain protein with a domain protein (DUF21)
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52790.4 11Arabidopsis thaliana03961001000 (0)S
AT5G52790.5 11Arabidopsis thaliana0381991000 (0)S
AT5G52790.3 11Arabidopsis thaliana03801001000 (0)S
Os03g03430.1 7Oryza sativa1E-17851854690 (0)S
Os03g47120.1 7Oryza sativa1E-14941255700 (0)S
Os05g32850.2 7Oryza sativa2E-13742949670 (0)M
Zm00001eb403660_P001 agpv5Zea mays3E-17951755680 (0)S
GRMZM2G092281_P01 3.21Zea mays3E-17951755680 (0)S
v1_GRMZM2G092281_P01 4a53Zea mays3E-17951755680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CBS(4) DUF21(1)
TargetP: Secreted (Class 2 C0.002; M0.035; S0.925; _0.218)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 500 aa (-cTP 491)
Molecular Weight 55.13 kDA(-cTP )
PI 5.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help