PPDB

PPDB	The Plant Proteome Database

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AT5G52660.1 Homeodomain-like superfamily protein

Lab Annot.

Homeodomain-like protein
Mapman: 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G52660.2 11 Arabidopsis thaliana 0 331 99 99 0 (0) C
AT4G01280.1 11 Arabidopsis thaliana 6E-91 271 56 69 0 (0) C
AT4G01280.2 11 Arabidopsis thaliana 9E-91 272 55 69 0 (0) C
Os02g45670.1 7 Oryza sativa 2E-106 258 63 72 0 (0) _
Os06g45840.2 7 Oryza sativa 3E-102 261 59 71 0 (0) _
Os06g45840.1 7 Oryza sativa 2E-101 262 59 70 0 (0) _
GRMZM2G057408_P01 3.21 Zea mays 1E-104 256 62 72 0 (0) _
Zm00001eb274210_P003 agpv5 Zea mays 1E-104 256 62 72 0 (0) _
v1_GRMZM2G057408_P01 4a53 Zea mays 1E-104 256 62 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Myb_DNA-bind_6(1) Myb_DNA-bind_7(1) Myb_DNA-binding(1)
TargetP:	Chloroplast (Class 4 C0.695; M0.100; S0.045; _0.320)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	330 aa (-cTP 282)
Molecular Weight	36.19 kDA(-cTP 31.49)
PI	8.98(-cTP 9.27)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data