PPDB

 The Plant Proteome Database

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AT5G52640.1   heat shock-like protein
Lab Annot. HSP90-1 (HSP81-1/83)
Mapman: 29.6 protein.folding
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56000.1 11Arabidopsis thaliana07018593530 (336)S
AT5G56030.1 11Arabidopsis thaliana070186941258 (699)S
AT5G56010.1 11Arabidopsis thaliana07018693997 (562)S
Os09g30412.1 7Oryza sativa06998894113 (113)_
Os09g30418.1 7Oryza sativa06988894133 (133)_
Os09g30439.1 6Oryza sativa0698889472 (72)_
GRMZM5G833699_P01 3.21Zea mays0703879353 (43)_
Zm00001eb418610_P001 agpv5Zea mays070387930 (0)_
GRMZM2G069651_P01 3.21Zea mays06998994205 (157)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HATPase_c(1) HATPase_c_3(1) HSP90(1) LOH1CR12(1)
TargetP: Cytoplasm (Class 5 C0.081; M0.058; S0.441; _0.458)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 700 aa (-cTP 698)
Molecular Weight 80.63 kDA(-cTP )
PI 4.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
244Detail       leaf [A. thaliana] total leaf tissue clpr2-1
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
484Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1518Detail       leaf [A. thaliana] wild-type
1519Detail       leaf [A. thaliana] wild-type
1520Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1523Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1613Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2250Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 16287169(Cell Wall proteome)
17644812(plasma membrane - suspension cells)
17660356(tonoplast (Brassica oleracea buds))
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19245862(nuclear phosphoproteins (seedlings & cell culture))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
19376835(leaf phosphoproteins)
19292762(Ubiquitin-affinity seedling (10 d))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help