PPDB

The Plant Proteome Database

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AT5G52620.1   F-box associated ubiquitination effector family protein

Lab Annot. F-box associated ubiquitination effector protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57590.1 11Arabidopsis thaliana5E-8337943580 (0)C
AT5G42430.1 11Arabidopsis thaliana3E-7938243560 (0)_
AT1G33020.1 11Arabidopsis thaliana1E-7738442560 (0)_
Os09g20650.1 7Oryza sativa9E-0731325420 (0)_
Os09g20650.2 7Oryza sativa1E-0631325420 (0)_
Os10g34340.1 7Oryza sativa2E-0618627410 (0)C
GRMZM2G047777_P01 3.21Zea mays1E-0928226430 (0)_
Zm00001eb101520_P001 agpv5Zea mays1E-0928226430 (0)_
Zm00001eb101520_P002 agpv5Zea mays1E-0928226430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) FBA_1(3) FBA_3(1) NIL(1)
TargetP: Cytoplasm (Class 2 C0.159; M0.079; S0.044; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 375 aa (-cTP 309)
Molecular Weight 42.75 kDA(-cTP )
PI 6.04(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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