PPDB

PPDB	The Plant Proteome Database

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AT5G52580.1 RabGAP/TBC domain-containing protein

Lab Annot.

RabGAP/TBC domain-containing protein
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G52580.3 11 Arabidopsis thaliana 0 679 99 99 0 (0) _
AT5G52580.2 11 Arabidopsis thaliana 0 690 97 97 3 (0) _
AT4G28550.1 11 Arabidopsis thaliana 1E-37 282 32 50 0 (0) _
Os02g48000.1 7 Oryza sativa 0 658 60 74 0 (0) _
Os02g48000.2 7 Oryza sativa 0 658 60 74 0 (0) _
Os02g48000.3 7 Oryza sativa 0 661 50 64 0 (0) _
GRMZM2G156320_P01 3.21 Zea mays 0 664 60 74 0 (0) _
Zm00001eb188660_P003 agpv5 Zea mays 0 664 60 74 0 (0) _
Zm00001eb188660_P004 agpv5 Zea mays 0 664 59 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3024(2) LPD39(1) PH_RBD(2) RabGAP-TBC(1)
TargetP:	Cytoplasm (Class 1 C0.095; M0.083; S0.102; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	673 aa (-cTP 647)
Molecular Weight	77.67 kDA(-cTP )
PI	5.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2272	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data