PPDB

The Plant Proteome Database

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AT5G52540.1   keratin-associated protein%2C putative (DUF819)

Lab Annot. unknown membrane protein (DUF819 domain)
Mapman: 35.2 not assigned.unknown
Curated Location envelope (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24000.1 11Arabidopsis thaliana9E-15938461770 (0)C
Os06g01790.1 7Oryza sativa2E-14137361752 (2)C
GRMZM2G084944_P01 3.21Zea mays1E-13140654710 (0)C
v1_GRMZM2G084944_P01 4a53Zea mays1E-13140654710 (0)C
Zm00001eb379280_P002 agpv5Zea mays1E-13140654710 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF819(1)
TargetP: Chloroplast (Class 1 C0.956; M0.138; S0.001; _0.009)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 10 TMs
Aramemnon: 9 TMs
TAT position:
Length 461 aa (-cTP 388)
Molecular Weight 47.64 kDA(-cTP 39.57)
PI 9.96(-cTP 9.49)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
19995728(proplastid (Brassica napus))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data


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