PPDB

 The Plant Proteome Database

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AT5G52330.1   TRAF-like superfamily protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52330.4 11Arabidopsis thaliana03971001000 (0)_
AT5G52330.3 11Arabidopsis thaliana03971001000 (0)_
AT5G52330.2 11Arabidopsis thaliana03461001000 (0)S
Os12g40520.1 7Oryza sativa2E-15539560740 (0)_
Os01g56800.3 7Oryza sativa3E-14037060730 (0)_
Os01g56800.1 7Oryza sativa4E-14037060730 (0)M
Zm00001eb030950_P001 agpv5Zea mays2E-15537661760 (0)_
v1_GRMZM2G145300_P01 4a53Zea mays1E-14536859760 (0)_
GRMZM2G145300_P01 3.21Zea mays1E-14536859760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MATH(2)
TargetP: Cytoplasm (Class 1 C0.067; M0.119; S0.092; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 397 aa (-cTP 358)
Molecular Weight 46.77 kDA(-cTP )
PI 7.09(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help