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PPDB	The Plant Proteome Database

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AT5G52300.1 CAP160 protein

Lab Annot.

CAP160 protein
Mapman: 20.2.2 stress.abiotic.cold

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G52300.2 11 Arabidopsis thaliana 0 619 99 99 7 (4) _
AT4G25580.1 11 Arabidopsis thaliana 2E-105 686 42 55 4 (3) _
AT5G52310.1 11 Arabidopsis thaliana 6E-102 361 57 67 128 (89) _
Os10g36180.1 7 Oryza sativa 8E-09 165 32 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Antimicrobial_7(3) CAP160(2) PGA2(2)
TargetP:	Cytoplasm (Class 2 C0.071; M0.141; S0.094; _0.927)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	619 aa (-cTP 600)
Molecular Weight	65.97 kDA(-cTP )
PI	5.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2291	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP
2311	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
18599647(seed proteome)
18436743(specific to seeds)
19253305(phosphoproteins (etiolated seedling))

Comparative Proteomics Data