PPDB

PPDB	The Plant Proteome Database

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AT5G52150.1 RING/U-box superfamily protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G52140.1 11 Arabidopsis thaliana 1E-36 271 36 49 0 (0) _
AT5G52155.1 11 Arabidopsis thaliana 3E-28 142 45 54 0 (0) M
AT5G52155.2 11 Arabidopsis thaliana 1E-17 124 42 51 0 (0) M
Os04g48260.1 7 Oryza sativa 4E-14 157 32 47 0 (0) _
Os02g55520.1 7 Oryza sativa 4E-12 65 43 63 0 (0) M
Os02g55520.2 7 Oryza sativa 4E-12 65 43 63 0 (0) M
GRMZM2G081060_P01 3.21 Zea mays 2E-17 168 33 50 0 (0) _
GRMZM2G081060_P02 3.21 Zea mays 2E-17 168 33 50 0 (0) _
Zm00001eb073620_P001 agpv5 Zea mays 8E-14 118 33 54 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CHDCT2(1) FANCL_C(1) PHD(1) Prok-RING_1(1) RINGv(1) Vps39_2(2) zf-ANAPC11(1) zf-
TargetP:	Cytoplasm (Class 3 C0.059; M0.078; S0.286; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	200 aa (-cTP 198)
Molecular Weight	22.63 kDA(-cTP )
PI	4.60(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data