PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G52030.1   TraB family protein
Lab Annot. TraB protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52030.2 11Arabidopsis thaliana02581001000 (0)_
AT1G05270.1 11Arabidopsis thaliana3E-1614131530 (0)_
AT2G32340.1 11Arabidopsis thaliana7E-1413032540 (0)_
Os08g43230.1 7Oryza sativa1E-9524962740 (0)C
Os05g42010.1 7Oryza sativa3E-1414834550 (0)C
Os05g42010.2 7Oryza sativa7E-0811733540 (0)C
Zm00001eb037540_P005 agpv5Zea mays4E-9325159740 (0)C
Zm00001eb037540_P002 agpv5Zea mays6E-9324959740 (0)C
v1_GRMZM2G159581_P01 4a53Zea mays2E-9124959740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: TraB(1)
TargetP: Cytoplasm (Class 3 C0.298; M0.043; S0.016; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 190)
Molecular Weight 28.17 kDA(-cTP )
PI 6.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help