PPDB

The Plant Proteome Database

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AT5G52020.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12630.1 11Arabidopsis thaliana4E-3718056680 (0)M
AT4G25490.1 11Arabidopsis thaliana7E-3621841530 (0)_
AT4G25480.1 11Arabidopsis thaliana6E-3520741540 (0)_
Os02g45420.1 7Oryza sativa7E-3923345580 (0)_
Os01g73770.1 7Oryza sativa3E-2915042600 (0)C
Os02g43940.1 7Oryza sativa2E-269760730 (0)C
Zm00001eb073560_P001 agpv5Zea mays8E-4320544540 (0)C
v1_GRMZM2G368838_P01 4a53Zea mays8E-4320544540 (0)C
Zm00001eb073560_P002 agpv5Zea mays8E-4320544540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Chloroplast (Class 3 C0.924; M0.014; S0.004; _0.399)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 232 aa (-cTP 152)
Molecular Weight 25.11 kDA(-cTP 16.61)
PI 4.86(-cTP 4.29)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help