PPDB

The Plant Proteome Database

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AT5G51990.1   C-repeat-binding factor 4

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25470.1 11Arabidopsis thaliana1E-9822666760 (0)_
AT4G25490.1 11Arabidopsis thaliana7E-9219571800 (0)_
AT4G25480.1 11Arabidopsis thaliana9E-9122465730 (0)_
Os04g48350.1 7Oryza sativa1E-4820049630 (0)_
Os01g73770.1 7Oryza sativa7E-4817149630 (0)C
Os02g45450.1 7Oryza sativa1E-4321450640 (0)C
Zm00001eb139970_P001 agpv5Zea mays1E-4321842560 (0)C
GRMZM2G097182_P01 3.21Zea mays1E-4321842560 (0)C
v1_GRMZM2G097182_P01 4a53Zea mays1E-4321842560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AIF_C(1) AP2(1) HERV-K_env_2(1) IF4E(1)
TargetP: Chloroplast (Class 3 C0.871; M0.024; S0.012; _0.397)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 224 aa (-cTP 166) (-lTP 87)
Molecular Weight 24.96 kDA(-cTP 18.33)(-lTP 9.57)
PI 5.56(-cTP 4.66)(-lTP 3.909)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help