PPDB

PPDB	The Plant Proteome Database

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AT5G51980.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G51980.2 11 Arabidopsis thaliana 0 437 100 100 0 (0) _
AT4G25440.3 11 Arabidopsis thaliana 0 436 83 91 0 (0) _
AT4G25440.2 11 Arabidopsis thaliana 0 436 83 91 0 (0) _
Os02g45480.1 7 Oryza sativa 0 446 59 73 0 (0) _
Os02g45480.4 7 Oryza sativa 2E-131 241 70 87 0 (0) _
Os02g45480.2 7 Oryza sativa 2E-129 353 55 69 0 (0) _
Zm00001eb250580_P003 agpv5 Zea mays 0 436 59 74 0 (0) _
v1_GRMZM2G037200_P02 4a53 Zea mays 0 436 59 74 1 (1) _
GRMZM2G037200_P02 3.21 Zea mays 0 436 59 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4550(2) Ge1_WD40(2) Nup160(3) PQQ_3(2) Torus(2) WD40(7) zf-CCCH(2) zf-CCCH_2(
TargetP:	Cytoplasm (Class 2 C0.124; M0.188; S0.003; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	437 aa (-cTP 413)
Molecular Weight	47.29 kDA(-cTP )
PI	7.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data