PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G51840.1   junctophilin-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g11060.1 7Oryza sativa3E-9324160750 (0)_
Zm00001eb027200_P001 agpv5Zea mays1E-8524955710 (0)_
GRMZM2G015880_P02 3.21Zea mays1E-8524955710 (0)_
GRMZM2G015880_P01 3.21Zea mays6E-7215069880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ASL_C(2) Atg14(1) DUF2408(1) DUF349(1) Exonuc_VII_L(1) Gastrin(1) HAUS6_N(1) Spc
TargetP: Cytoplasm (Class 2 C0.086; M0.107; S0.130; _0.847)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 245 aa (-cTP 236)
Molecular Weight 27.09 kDA(-cTP )
PI 7.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20118269(developing seeds)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help