PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G51830.1   pfkB-like carbohydrate kinase family protein

Lab Annot. FRUCTOKINASE 1 (FRK1) (phosphofructokinase B (pfkB) family)
Mapman: 2.2.1.1 major CHO metabolism.degradation.sucrose.fructokinase
Curated Location cytosol (Pubmed: 28441933 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51830.2 11Arabidopsis thaliana03431001000 (0)_
AT1G66430.1 11Arabidopsis thaliana1E-1733157387269 (204)C
AT4G10260.1 11Arabidopsis thaliana3E-15131866791 (1)_
Os06g12600.1 7Oryza sativa2E-163320718532 (32)C
Os01g66940.1 7Oryza sativa2E-148318657954 (54)S
Os08g02120.1 7Oryza sativa5E-1443186378103 (103)_
Zm00001eb372200_P002 agpv5Zea mays3E-16232569840 (0)C
GRMZM2G072091_P01 3.21Zea mays3E-162325698435 (31)C
v1_GRMZM2G072091_P01 4a53Zea mays3E-162325698431 (31)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PfkB(1)
TargetP: Cytoplasm (Class 1 C0.111; M0.046; S0.104; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 343 aa (-cTP 286)
Molecular Weight 37.03 kDA(-cTP )
PI 4.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
16502469(cell suspension-CD-down)
19546170(mature pollen grains)
20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help