PPDB

PPDB	The Plant Proteome Database

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AT5G51730.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G18610.1 11 Arabidopsis thaliana 4E-14 81 38 66 1 (1) _
AT3G18610.3 11 Arabidopsis thaliana 4E-14 81 38 66 0 (0) _
AT3G18610.2 11 Arabidopsis thaliana 4E-14 81 38 66 0 (0) _
Os04g52960.1 7 Oryza sativa 1E-07 122 31 45 23 (23) _
Os08g09350.1 7 Oryza sativa 2E-07 106 34 49 8 (8) _
Zm00001eb046260_P003 agpv5 Zea mays 3E-09 95 36 54 0 (0) C
Zm00001eb046260_P002 agpv5 Zea mays 3E-09 95 36 54 0 (0) C
Zm00001eb046260_P001 agpv5 Zea mays 3E-09 97 36 54 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BSP_II(1) DUF1664(1) End3(2) HALZ(1) LPP(1) Nup35_RRM_2(1) SKA1(1) TERF2_RBM(1)
TargetP:	Cytoplasm (Class 2 C0.147; M0.071; S0.044; _0.887)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	317 aa (-cTP 311)
Molecular Weight	34.97 kDA(-cTP )
PI	8.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data