PPDB

The Plant Proteome Database

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AT5G51590.1   AT hook motif DNA-binding family protein

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25320.1 11Arabidopsis thaliana4E-14639961690 (0)_
AT5G62260.1 11Arabidopsis thaliana7E-7023453670 (0)_
AT5G62260.3 11Arabidopsis thaliana7E-7023453670 (0)_
Os02g03270.1 7Oryza sativa3E-6526352610 (0)_
Os08g02490.1 7Oryza sativa8E-5923954670 (0)_
Os10g42230.2 7Oryza sativa1E-5523148600 (0)C
Zm00001eb035320_P003 agpv5Zea mays2E-6225348620 (0)_
Zm00001eb035320_P002 agpv5Zea mays2E-6225348620 (0)_
Zm00001eb035320_P005 agpv5Zea mays2E-6225348620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: API5(1) DAG1(1) PCC(1) RFX5_DNA_bdg(1)
TargetP: Cytoplasm (Class 4 C0.372; M0.087; S0.002; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 419 aa (-cTP 370)
Molecular Weight 44.59 kDA(-cTP )
PI 5.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help