PPDB

The Plant Proteome Database

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AT5G51570.1   SPFH/Band 7/PHB domain-containing membrane-associated protein family

Lab Annot. band 7 protein
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62740.1 11Arabidopsis thaliana4E-123287567825 (25)_
AT3G01290.1 11Arabidopsis thaliana2E-122283577774 (69)_
AT1G69840.1 11Arabidopsis thaliana3E-114281577756 (55)_
Os06g04460.1 7Oryza sativa3E-16728779900 (0)S
Os05g51420.2 7Oryza sativa3E-12328757780 (0)_
Os05g51420.4 7Oryza sativa3E-12328757780 (0)_
Zm00001eb269970_P001 agpv5Zea mays1E-16528777910 (0)S
GRMZM2G173858_P02 3.21Zea mays1E-16528777910 (0)S
GRMZM2G150762_P03 3.21Zea mays6E-12327258791 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACTL7A_N(1) Band_7(1) LPP20(2)
TargetP: Cytoplasm (Class 3 C0.150; M0.141; S0.106; _0.654)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 292 aa (-cTP 279)
Molecular Weight 32.38 kDA(-cTP )
PI 5.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1615Detail       Natural Senescence leaf [A. thaliana]  
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21173025(root proteome)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help