PPDB

 The Plant Proteome Database

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AT5G51450.1   RPM1 interacting protein 3
Lab Annot. RPM1 interacting protein 3
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51450.2 11Arabidopsis thaliana059596960 (0)S
AT4G25230.2 11Arabidopsis thaliana057885910 (0)S
AT4G25230.1 11Arabidopsis thaliana057885910 (0)S
Os07g30100.1 7Oryza sativa7E-17753250660 (0)S
Os07g30100.2 7Oryza sativa1E-13535856720 (0)S
Os06g19680.2 7Oryza sativa1E-2231926450 (0)S
Zm00001eb105020_P001 agpv5Zea mays3E-17155348640 (0)S
GRMZM2G097089_P01 3.21Zea mays3E-17155348640 (0)S
Zm00001eb321470_P002 agpv5Zea mays3E-17053148670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CUE(1) E3_UbLigase_EDD(1) Endonuclease_7(1) FANCL_C(1) PHD(1) Prok-RING_4(1) RIN
TargetP: Secreted (Class 5 C0.012; M0.166; S0.379; _0.248)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 577 aa (-cTP 567)
Molecular Weight 64.52 kDA(-cTP )
PI 6.50(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help