PPDB

The Plant Proteome Database

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AT5G51410.1   LUC7 N terminus domain-containing protein

Lab Annot. LUC7 N_terminus domain-containing protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51410.2 11Arabidopsis thaliana03341001001 (1)_
AT5G51410.4 11Arabidopsis thaliana03341001000 (0)_
AT5G51410.5 11Arabidopsis thaliana03341001000 (0)_
Os07g27300.2 7Oryza sativa3E-13532963760 (0)_
Os07g27300.1 7Oryza sativa3E-13532963760 (0)_
Os03g62640.2 7Oryza sativa5E-1818432540 (0)_
Zm00001eb096610_P003 agpv5Zea mays9E-13432564760 (0)_
Zm00001eb096610_P002 agpv5Zea mays9E-13432564760 (0)_
GRMZM5G872997_P02 3.21Zea mays9E-13432564760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CDC45(1) LUC7(1)
TargetP: Cytoplasm (Class 2 C0.075; M0.186; S0.066; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 334 aa (-cTP 315)
Molecular Weight 38.72 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help