PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G51170.1   U6 snRNA phosphodiesterase-like protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51170.4 11Arabidopsis thaliana028590900 (0)_
AT5G51170.3 11Arabidopsis thaliana1E-14820499990 (0)S
AT5G51170.2 11Arabidopsis thaliana4E-14320397991 (1)_
Os02g43480.1 7Oryza sativa1E-9023156720 (0)_
Zm00001eb249040_P001 agpv5Zea mays1E-8829548660 (0)_
v1_GRMZM2G156575_P01 4a53Zea mays7E-6918956740 (0)_
GRMZM2G156575_P01 3.21Zea mays7E-6918956740 (0)_

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HVSL(1)
TargetP: Cytoplasm (Class 4 C0.559; M0.022; S0.053; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 285 aa (-cTP 220)
Molecular Weight 31.85 kDA(-cTP )
PI 7.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help