PPDB

The Plant Proteome Database

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AT5G51140.1   Pseudouridine synthase family protein

Lab Annot. Pseudouridine synthase protein
Mapman: 29.1.30 protein.aa activation.pseudouridylate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51140.2 11Arabidopsis thaliana03861001000 (0)_
AT3G52260.4 11Arabidopsis thaliana9E-1927626470 (0)_
AT3G52260.2 11Arabidopsis thaliana2E-1827626470 (0)_
Os02g30840.1 7Oryza sativa4E-16537859740 (0)_
Os02g30840.2 7Oryza sativa3E-12430458720 (0)_
Os03g17920.2 7Oryza sativa5E-0919525470 (0)_
Zm00001eb241970_P001 agpv5Zea mays3E-16337460720 (0)_
GRMZM2G147335_P03 3.21Zea mays3E-16337460720 (0)_
Zm00001eb241970_P002 agpv5Zea mays1E-15935462740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PseudoU_synth_2(1) S4(1)
TargetP: Cytoplasm (Class 2 C0.199; M0.059; S0.052; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 395 aa (-cTP 315)
Molecular Weight 44.62 kDA(-cTP )
PI 6.28(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help