PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G51080.3   RNase H family protein

Lab Annot. RNAse H1B (RNH1B)
Mapman: 27.1.2 RNA.processing.RNA helicase
Curated Location mitochondria (Pubmed: 28939594 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51080.1 11Arabidopsis thaliana02591001000 (0)M
AT5G51080.2 11Arabidopsis thaliana02591001000 (0)M
AT1G24090.1 11Arabidopsis thaliana2E-14528474810 (0)C
Os08g08050.1 7Oryza sativa2E-8125048680 (0)M
Os10g32060.1 7Oryza sativa1E-4713754730 (0)_
Os10g34078.1 7Oryza sativa1E-1414835510 (0)M
GRMZM2G051374_P04 3.21Zea mays3E-8225549670 (0)_
GRMZM2G051374_P03 3.21Zea mays7E-8226148660 (0)_
GRMZM2G051374_P01 3.21Zea mays7E-8226148660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cauli_VI(1) DUF4220(1) RNase_H(1) RVT_3(1)
TargetP: Cytoplasm (Class 2 C0.047; M0.162; S0.113; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 259 aa (-cTP 250)
Molecular Weight 28.24 kDA(-cTP )
PI 5.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help