PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G51040.1   succinate dehydrogenase assembly factor
Lab Annot. unknown DUF339
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51040.3 11Arabidopsis thaliana4E-13619795951 (1)M
AT5G51040.2 11Arabidopsis thaliana3E-13318897971 (1)M
AT5G51040.4 11Arabidopsis thaliana3E-8112793940 (0)M
Os11g32480.1 7Oryza sativa1E-6313468840 (0)M
Zm00001eb198100_P001 agpv5Zea mays1E-6413366830 (0)M
GRMZM2G046574_P01 3.21Zea mays1E-6413366838 (8)M
v1_GRMZM2G046574_P01 4a53Zea mays5E-6413366835 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Sdh5(1)
TargetP: Mitochondria (Class 2 C0.091; M0.770; S0.016; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 188 aa (-cTP 173)
Molecular Weight 21.28 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help