PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G50990.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G62890.1 11 Arabidopsis thaliana 1E-133 516 40 61 0 (0) C
AT5G66520.1 11 Arabidopsis thaliana 1E-129 506 40 60 4 (4) _
AT4G21065.2 11 Arabidopsis thaliana 5E-128 428 44 65 0 (0) _
Os03g60690.1 7 Oryza sativa 2E-127 503 38 58 0 (0) C
Os07g02280.1 7 Oryza sativa 5E-127 486 40 60 0 (0) C
Os07g05560.1 7 Oryza sativa 6E-124 535 39 56 0 (0) M
Zm00001eb396480_P002 agpv5 Zea mays 6E-163 506 45 66 0 (0) M
Zm00001eb396480_P003 agpv5 Zea mays 6E-163 506 45 66 0 (0) M
v1_GRMZM2G306482_P01 4a53 Zea mays 6E-163 506 45 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DSX_dimer(1) DYW_deaminase(1) PPR(7) PPR_1(6) PPR_2(6) PPR_3(8) PPR_long(2) Pput
TargetP:	Mitochondria (Class 4 C0.107; M0.451; S0.101; _0.087)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	534 aa (-cTP 514)
Molecular Weight	60.04 kDA(-cTP )
PI	9.07(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data