PPDB

The Plant Proteome Database

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AT5G50960.1   nucleotide binding protein 35

Lab Annot. Nbp35 assembles cytosolic iron-sulfur clusters
Mapman: 15 metal handling
Curated Location cytosol (Pubmed: 19084504 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19540.1 11Arabidopsis thaliana6E-3829333500 (0)M
AT3G24430.1 11Arabidopsis thaliana3E-331804159176 (126)C
Os04g40880.3 7Oryza sativa034780890 (0)_
Os02g38900.1 7Oryza sativa033980890 (0)_
Os04g40880.1 7Oryza sativa4E-17430081890 (0)_
v1_GRMZM2G031496_P01 4a53Zea mays034779891 (1)_
GRMZM2G031496_P01 3.21Zea mays034779893 (3)_
Zm00001eb183970_P002 agpv5Zea mays034979890 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_25(1) AAA_26(3) AAA_31(1) ArsA_ATPase(2) CbiA(1) CBP_BcsQ(1) Fer4_NifH(2) Me
TargetP: Cytoplasm (Class 2 C0.260; M0.076; S0.028; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 350 aa (-cTP 286)
Molecular Weight 37.31 kDA(-cTP )
PI 4.79(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help