PPDB

The Plant Proteome Database

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AT5G50950.1   FUMARASE 2

Lab Annot. fumarate hydratase, putative / fumarase, putative
Mapman: 8.1.8 TCA / org.transformation.TCA.fumarase
Curated Location
TAIR curated location: mitochondrion14671022,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50950.2 11Arabidopsis thaliana04979596140 (74)_
AT2G47510.1 11Arabidopsis thaliana04659194248 (142)M
AT2G47510.3 11Arabidopsis thaliana046591940 (0)M
Os03g21950.1 7Oryza sativa0462839110 (10)M
Os03g19280.1 7Oryza sativa5E-07228254221 (21)C
Zm00001eb016240_P002 agpv5Zea mays046582890 (0)M
Zm00001eb016240_P001 agpv5Zea mays046582890 (0)M
GRMZM2G010823_P01 3.21Zea mays0465828925 (25)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FumaraseC_C(1) Lyase_1(1)
TargetP: Cytoplasm (Class 2 C0.207; M0.063; S0.159; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 510 aa (-cTP 496)
Molecular Weight 55.77 kDA(-cTP )
PI 6.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1420Detail        [A. thaliana]  
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1637Detail       leaf [A. thaliana] total leaf tissue stromaWild-type
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15052571(soluble leaf)
17916636(root (NaCl stress))
19452453(14-3-3-interacting proteins)
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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