PPDB

The Plant Proteome Database

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AT5G50915.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50915.2 11Arabidopsis thaliana02861001000 (0)_
AT5G50915.4 11Arabidopsis thaliana02621001000 (0)_
AT5G50915.3 11Arabidopsis thaliana02621001000 (0)_
Os08g42470.1 7Oryza sativa4E-5616957690 (0)C
Os05g01256.2 7Oryza sativa1E-5116256670 (0)_
Os05g01256.1 7Oryza sativa1E-5116256670 (0)_
v1_GRMZM2G046493_P02 4a53Zea mays2E-5115056700 (0)_
v1_GRMZM2G046493_P01 4a53Zea mays7E-5115055710 (0)_
GRMZM5G882527_P02 3.21Zea mays1E-5015056700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5553(1) HLH(1)
TargetP: Cytoplasm (Class 4 C0.095; M0.161; S0.039; _0.540)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 286 aa (-cTP 243)
Molecular Weight 31.77 kDA(-cTP )
PI 6.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help