PPDB

The Plant Proteome Database

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AT5G50770.1   hydroxysteroid dehydrogenase 6

Lab Annot. hydroxysteroid dehydrogenase 6
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50600.1 11Arabidopsis thaliana5E-103337456349 (38)S
AT5G50700.1 11Arabidopsis thaliana5E-103337456349 (38)S
AT3G47350.1 11Arabidopsis thaliana1E-8631844620 (0)S
Os12g27830.1 7Oryza sativa5E-9733545630 (0)S
Os04g32070.1 7Oryza sativa5E-9029248641 (1)_
Os11g30560.1 7Oryza sativa6E-7828744632 (2)S
GRMZM2G006119_P01 3.21Zea mays5E-9933447640 (0)_
GRMZM2G006119_P03 3.21Zea mays5E-9933447640 (0)_
Zm00001eb328980_P001 agpv5Zea mays5E-9933447640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: adh_short(1) adh_short_C2(1) KR(1)
TargetP: Secreted (Class 1 C0.001; M0.101; S0.973; _0.056)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 342 aa (-cTP 292)
Molecular Weight 37.99 kDA(-cTP )
PI 8.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help